Description : (at4g17490 : 92.8) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 6 (ERF6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 5 (TAIR:AT5G47230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40478|erf5_tobac : 89.0) Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) - Nicotiana tabacum (Common tobacco) & (reliability: 185.6) & (original description: no original description)
Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00032588-RA | |
Cluster | HCCA clusters: Cluster_163 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Glyma.13G298600 | No alias | Integrase-type DNA-binding superfamily protein | 0.03 | Orthogroups_2024-Update | |
PSME_00008862-RA | No alias | (q6k7e6|erf1_orysa : 93.6) Ethylene-responsive... | 0.07 | Orthogroups_2024-Update | |
PSME_00038114-RA | No alias | (q9lw48|erf5_nicsy : 94.4) Ethylene-responsive... | 0.04 | Orthogroups_2024-Update | |
PSME_00041322-RA | No alias | (q40476|erf1_tobac : 120.0) Ethylene-responsive... | 0.03 | Orthogroups_2024-Update | |
PSME_00046052-RA | No alias | (at1g19210 : 89.0) encodes a member of the DREB... | 0.04 | Orthogroups_2024-Update | |
PSME_00047383-RA | No alias | (at5g21960 : 119.0) encodes a member of the DREB... | 0.05 | Orthogroups_2024-Update | |
PSME_00048384-RA | No alias | (at5g11190 : 113.0) encodes a member of the ERF... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004144 | diacylglycerol O-acyltransferase activity | IEP | Predicted GO |
MF | GO:0008374 | O-acyltransferase activity | IEP | Predicted GO |
MF | GO:0016411 | acylglycerol O-acyltransferase activity | IEP | Predicted GO |
BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Predicted GO |
BP | GO:0046486 | glycerolipid metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001471 | AP2/ERF_dom | 125 | 175 |
No external refs found! |