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  5. Sopen06g004180

Sopen06g004180


Description : PPR repeat family


Gene families : OG_42_0004350 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004350_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g004180
Cluster HCCA clusters: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
At2g31400 No alias Pentatricopeptide repeat-containing protein At2g31400,... 0.02 Orthogroups_2024-Update
PSME_00019025-RA No alias (at2g31400 : 183.0) Encodes a a chloroplast-localized... 0.02 Orthogroups_2024-Update
Pp1s344_9V6 No alias F25A4.18; pentatricopeptide (PPR) repeat-containing... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 454 483
IPR033443 PPR_long 294 444
IPR002885 Pentatricopeptide_repeat 259 289
IPR002885 Pentatricopeptide_repeat 192 253
IPR002885 Pentatricopeptide_repeat 592 619
IPR002885 Pentatricopeptide_repeat 486 532
No external refs found!