1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00032766-RA

PSME_00032766-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000349 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00032766-RA
Cluster HCCA clusters: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
At1g19180 No alias TIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1] 0.02 Orthogroups_2024-Update
Brara.F01223.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G117513 No alias TIFY domain/Divergent CCT motif family protein 0.02 Orthogroups_2024-Update
GRMZM5G838098 No alias jasmonate-zim-domain protein 1 0.03 Orthogroups_2024-Update
Glyma.04G013800 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
Glyma.08G264701 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
Glyma.17G047700 No alias jasmonate-zim-domain protein 1 0.03 Orthogroups_2024-Update
HORVU4Hr1G076840.5 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.02 Orthogroups_2024-Update
MA_470613g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00003980-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00014976-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00024545-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00024561-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00046059-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.001G166200 No alias jasmonate-zim-domain protein 5 0.03 Orthogroups_2024-Update
Pp1s442_14V6 No alias MEB5.8; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.9G518100.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G259900.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G482600.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR010399 Tify_dom 86 106
No external refs found!