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  5. PSME_00032769-RA

PSME_00032769-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0002139 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00032769-RA
Cluster HCCA clusters: Cluster_704

Target Alias Description ECC score Gene Family Method Actions
PSME_00009040-RA No alias (at3g17450 : 104.0) hAT dimerisation domain-containing... 0.05 Orthogroups_2024-Update
PSME_00009409-RA No alias (at3g22220 : 94.4) hAT transposon superfamily; FUNCTIONS... 0.06 Orthogroups_2024-Update
PSME_00009569-RA No alias (at3g17450 : 98.2) hAT dimerisation domain-containing... 0.04 Orthogroups_2024-Update
PSME_00028805-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00034956-RA No alias (at3g17450 : 83.2) hAT dimerisation domain-containing... 0.07 Orthogroups_2024-Update
PSME_00047300-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00047409-RA No alias (at3g17450 : 85.9) hAT dimerisation domain-containing... 0.05 Orthogroups_2024-Update
PSME_00048076-RA No alias (at3g17450 : 107.0) hAT dimerisation domain-containing... 0.04 Orthogroups_2024-Update
PSME_00050555-RA No alias no hits & (original description: no original description) 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR007021 DUF659 4 38
No external refs found!