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  5. PSME_00032772-RA

PSME_00032772-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000300 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00032772-RA
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Brara.E01987.1 No alias arabinogalactan protein *(Xylogen) 0.02 Orthogroups_2024-Update
Brara.F02290.1 No alias arabinogalactan protein *(Xylogen) 0.02 Orthogroups_2024-Update
Brara.K01519.1 No alias arabinogalactan protein *(Xylogen) 0.03 Orthogroups_2024-Update
GRMZM2G157536 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Orthogroups_2024-Update
Potri.001G210100 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Orthogroups_2024-Update
Seita.5G357100.1 No alias arabinogalactan protein *(Xylogen) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 14 112
No external refs found!