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  5. PSME_00032973-RA

PSME_00032973-RA


Description : (at1g12570 : 369.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT5G51950.1); Has 10555 Blast hits to 10382 proteins in 1112 species: Archae - 4; Bacteria - 3926; Metazoa - 806; Fungi - 1507; Plants - 299; Viruses - 12; Other Eukaryotes - 4001 (source: NCBI BLink). & (reliability: 726.0) & (original description: no original description)


Gene families : OG_42_0000273 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00032973-RA
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
235799 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.06 Orthogroups_2024-Update
405960 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
429523 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.05 Orthogroups_2024-Update
A4A49_18141 No alias protein hothead 0.05 Orthogroups_2024-Update
At1g72970 No alias HTH [Source:UniProtKB/TrEMBL;Acc:A0A178WG21] 0.03 Orthogroups_2024-Update
At5g51950 No alias AT5g51950/MSG15_3 [Source:UniProtKB/TrEMBL;Acc:Q94KD2] 0.03 Orthogroups_2024-Update
Bradi4g28870 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Brara.H02650.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.07G009900 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Glyma.08G193100 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Orthogroups_2024-Update
LOC_Os08g31030 No alias HOTHEAD precursor, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os09g19930 No alias HOTHEAD precursor, putative, expressed 0.05 Orthogroups_2024-Update
MA_10041123g0010 No alias (at1g73050 : 159.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
MA_101730g0010 No alias (at5g51950 : 159.0) Glucose-methanol-choline (GMC)... 0.04 Orthogroups_2024-Update
MA_10307468g0010 No alias (at1g14190 : 413.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
MA_10434427g0010 No alias (at5g51950 : 292.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
MA_111884g0010 No alias (at1g14190 : 311.0) Glucose-methanol-choline (GMC)... 0.04 Orthogroups_2024-Update
MA_11792g0020 No alias (at5g51950 : 284.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
MA_137064g0010 No alias (at1g14190 : 357.0) Glucose-methanol-choline (GMC)... 0.07 Orthogroups_2024-Update
MA_138671g0010 No alias (at5g51950 : 104.0) Glucose-methanol-choline (GMC)... 0.05 Orthogroups_2024-Update
MA_423598g0010 No alias (at1g14190 : 209.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
MA_762g0010 No alias (at1g14190 : 327.0) Glucose-methanol-choline (GMC)... 0.04 Orthogroups_2024-Update
MA_9196249g0010 No alias (at1g72970 : 113.0) Originally identified as a mutation... 0.05 Orthogroups_2024-Update
PSME_00025174-RA No alias (at1g14190 : 453.0) Glucose-methanol-choline (GMC)... 0.04 Orthogroups_2024-Update
PSME_00025333-RA No alias (at1g14190 : 320.0) Glucose-methanol-choline (GMC)... 0.04 Orthogroups_2024-Update
PSME_00029110-RA No alias (at1g72970 : 214.0) Originally identified as a mutation... 0.04 Orthogroups_2024-Update
PSME_00032064-RA No alias (at1g12570 : 349.0) Glucose-methanol-choline (GMC)... 0.06 Orthogroups_2024-Update
PSME_00032105-RA No alias (at1g14190 : 453.0) Glucose-methanol-choline (GMC)... 0.05 Orthogroups_2024-Update
PSME_00032502-RA No alias (at1g12570 : 436.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00038869-RA No alias (at1g14190 : 353.0) Glucose-methanol-choline (GMC)... 0.04 Orthogroups_2024-Update
PSME_00041186-RA No alias (at1g12570 : 451.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00042692-RA No alias (at1g14190 : 441.0) Glucose-methanol-choline (GMC)... 0.04 Orthogroups_2024-Update
PSME_00047795-RA No alias (at1g73050 : 409.0) Glucose-methanol-choline (GMC)... 0.05 Orthogroups_2024-Update
PSME_00051118-RA No alias (at5g51950 : 373.0) Glucose-methanol-choline (GMC)... 0.06 Orthogroups_2024-Update
Potri.001G111500 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.05 Orthogroups_2024-Update
Potri.010G168100 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.05 Orthogroups_2024-Update
Pp1s3_628V6 No alias glucose-methanol-choline oxidoreductase family protein 0.02 Orthogroups_2024-Update
Pp1s78_69V6 No alias unnamed protein product [Vitis vinifera] 0.03 Orthogroups_2024-Update
Solyc03g121600 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.03 Orthogroups_2024-Update
Solyc06g035580 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.02 Orthogroups_2024-Update
Solyc06g062600 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.03 Orthogroups_2024-Update
Sopen03g040410 No alias GMC oxidoreductase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 78 371
IPR007867 GMC_OxRtase_C 445 586
No external refs found!