PSME_00033009-RA


Description : (at5g36930 : 238.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 444.0) & (original description: no original description)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00033009-RA
Cluster HCCA clusters: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
Brara.B02529.1 No alias effector receptor *(NLR) 0.01 Orthogroups_2024-Update
Brara.D01147.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Glyma.16G214669 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Pp1s102_94V6 No alias MLF18.50; disease resistance protein (TIR-NBS-LRR... 0.03 Orthogroups_2024-Update
Solyc12g097000 No alias TIR-NBS-LRR class disease resistance protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 743 765
IPR002182 NB-ARC 194 422
IPR000157 TIR_dom 9 171
No external refs found!