PSME_00033017-RA

Description : (at1g47128 : 547.0) cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21); responsive to dehydration 21 (RD21); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: response to water deprivation; LOCATED IN: apoplast, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 8846 Blast hits to 8044 proteins in 757 species: Archae - 51; Bacteria - 244; Metazoa - 4223; Fungi - 6; Plants - 1942; Viruses - 134; Other Eukaryotes - 2246 (source: NCBI BLink). & (p25776|orya_orysa : 523.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (reliability: 1094.0) & (original description: no original description)

Gene families : OG_42_0000382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00033017-RA
Cluster	HCCA clusters: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
139792	No alias	xylem bark cysteine peptidase 3	0.02	Orthogroups_2024-Update
A4A49_16637	No alias	cysteine protease xcp2	0.03	Orthogroups_2024-Update
At1g47128	No alias	RD21A [Source:UniProtKB/TrEMBL;Acc:A0A178WIH7]	0.03	Orthogroups_2024-Update
At5g43060	No alias	Probable cysteine protease RD21B...	0.03	Orthogroups_2024-Update
Bradi5g24027	No alias	Granulin repeat cysteine protease family protein	0.03	Orthogroups_2024-Update
Brara.J00562.1	No alias	C1-class subclass RD21/XCP thiol protease & EC_3.4...	0.03	Orthogroups_2024-Update
GRMZM2G367701	No alias	xylem cysteine peptidase 2	0.02	Orthogroups_2024-Update
Glyma.04G014700	No alias	xylem cysteine peptidase 2	0.03	Orthogroups_2024-Update
HORVU2Hr1G121440.2	No alias	C1-class subclass RD21/XCP thiol protease & EC_3.4...	0.02	Orthogroups_2024-Update
LOC_Os04g57440	No alias	oryzain beta chain precursor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g43230	No alias	oryzain alpha chain precursor, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00032801-RA	No alias	(p25776\|orya_orysa : 319.0) Oryzain alpha chain...	0.04	Orthogroups_2024-Update
Potri.004G207600	No alias	xylem cysteine peptidase 1	0.03	Orthogroups_2024-Update
Sobic.009G190600.1	No alias	C1-class subclass XBCP3 cysteine protease & EC_3.4...	0.03	Orthogroups_2024-Update
Solyc04g082710	No alias	Cysteine protease, putative (AHRD V3.3 *** B9R8S7_RICCO)	0.03	Orthogroups_2024-Update
Sopen04g036340	No alias	Papain family cysteine protease	0.04	Orthogroups_2024-Update
Sopen12g031600	No alias	Papain family cysteine protease	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	InterProScan predictions
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004857	enzyme inhibitor activity	IEP	Predicted GO
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Predicted GO
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Predicted GO
MF	GO:0030234	enzyme regulator activity	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
CC	GO:0030684	preribosome	IEP	Predicted GO
MF	GO:0030695	GTPase regulator activity	IEP	Predicted GO
CC	GO:0032040	small-subunit processome	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Predicted GO
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO
MF	GO:0098772	molecular function regulator	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000118	Granulin	381	428
IPR000668	Peptidase_C1A_C	132	347
IPR013201	Prot_inhib_I29	44	101

External Links

No external refs found!

PSME_00033017-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation