Solyc02g070060

Description : FAD-binding Berberine family protein, putative (AHRD V3.3 *** A0A061G791_THECC)

Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc02g070060
Cluster	HCCA clusters: Cluster_169

Target	Alias	Description	ECC score	Gene Family Method
A4A49_28689	No alias	flavin-dependent oxidoreductase fox1	0.04	Orthogroups_2024-Update
Glyma.05G125600	No alias	FAD-binding Berberine family protein	0.03	Orthogroups_2024-Update
Potri.001G459100	No alias	FAD-binding Berberine family protein	0.03	Orthogroups_2024-Update
Potri.019G063400	No alias	FAD-binding Berberine family protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	InterProScan predictions
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	InterProScan predictions
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005102	signaling receptor binding	IEP	Predicted GO
CC	GO:0005576	extracellular region	IEP	Predicted GO
MF	GO:0008083	growth factor activity	IEP	Predicted GO
BP	GO:0008283	cell proliferation	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
BP	GO:0016049	cell growth	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
MF	GO:0030545	receptor regulator activity	IEP	Predicted GO
CC	GO:0031225	anchored component of membrane	IEP	Predicted GO
BP	GO:0040007	growth	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
MF	GO:0048018	receptor ligand activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR012951	BBE	463	522
IPR006094	Oxid_FAD_bind_N	72	208

External Links

No external refs found!