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  5. PSME_00033098-RA

PSME_00033098-RA


Description : (at3g24310 : 169.0) snapdragon myb protein 305 homolog (myb); myb domain protein 305 (MYB305); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 79 (TAIR:AT4G13480.1); Has 8987 Blast hits to 8204 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 778; Fungi - 510; Plants - 5849; Viruses - 4; Other Eukaryotes - 1846 (source: NCBI BLink). & (q4jl76|myba2_orysa : 165.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 338.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00033098-RA
Cluster HCCA clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Bradi4g41277 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Bradi5g13041 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Glyma.12G104800 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.16G063700 No alias myb domain protein 40 0.04 Orthogroups_2024-Update
Glyma.17G158000 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
HORVU3Hr1G063460.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
PSME_00020880-RA No alias (at1g66230 : 247.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00035672-RA No alias (at1g22640 : 238.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00050445-RA No alias (at5g40350 : 171.0) Myb24 transcription factor. Member... 0.04 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.04 Orthogroups_2024-Update
Potri.002G038500 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Potri.006G123400 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Potri.018G095900 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Pp1s106_216V6 No alias atmyb16 (myb domain protein 16) dna binding transcription factor 0.03 Orthogroups_2024-Update
Pp1s189_29V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.03 Orthogroups_2024-Update
Pp1s211_139V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.03 Orthogroups_2024-Update
Seita.1G239400.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G224700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sopen11g025590 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 75 118
IPR001005 SANT/Myb 22 67
No external refs found!