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  5. PSME_00033177-RA

PSME_00033177-RA


Description : (at4g25810 : 347.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (p35694|bru1_soybn : 347.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 664.0) & (original description: no original description)


Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00033177-RA
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
A4A49_21656 No alias xyloglucan endotransglucosylasehydrolase protein 24 0.05 Orthogroups_2024-Update
A4A49_26736 No alias xyloglucan endotransglucosylasehydrolase protein 15 0.04 Orthogroups_2024-Update
A4A49_26737 No alias xyloglucan endotransglucosylasehydrolase protein 15 0.04 Orthogroups_2024-Update
A4A49_30032 No alias putative xyloglucan endotransglucosylasehydrolase protein 16 0.04 Orthogroups_2024-Update
A4A49_36014 No alias putative xyloglucan endotransglucosylasehydrolase protein 16 0.02 Orthogroups_2024-Update
AC210669.3_FG001 No alias Xyloglucan endotransglucosylase/hydrolase family protein 0.07 Orthogroups_2024-Update
At2g06850 No alias Xyloglucan endotransglucosylase/hydrolase protein 4... 0.04 Orthogroups_2024-Update
At2g18800 No alias Xyloglucan endotransglucosylase/hydrolase... 0.04 Orthogroups_2024-Update
At3g25050 No alias Xyloglucan endotransglucosylase/hydrolase protein 3... 0.04 Orthogroups_2024-Update
At4g25810 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.03 Orthogroups_2024-Update
At4g28850 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.03 Orthogroups_2024-Update
At4g30290 No alias Xyloglucan endotransglucosylase/hydrolase... 0.03 Orthogroups_2024-Update
Bradi1g33810 No alias Xyloglucan endotransglucosylase/hydrolase family protein 0.04 Orthogroups_2024-Update
Brara.F01864.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.03 Orthogroups_2024-Update
Brara.J01168.1 No alias EC_2.4 glycosyltransferase 0.04 Orthogroups_2024-Update
GRMZM2G004699 No alias xyloglucan endotransglucosylase/hydrolase 5 0.02 Orthogroups_2024-Update
Glyma.05G109600 No alias xyloglucan endotransglucosylase/hydrolase 6 0.05 Orthogroups_2024-Update
Glyma.08G121200 No alias xyloglucan endotransglucosylase/hydrolase 16 0.03 Orthogroups_2024-Update
Glyma.12G197600 No alias xyloglucan endotransglucosylase/hydrolase 9 0.03 Orthogroups_2024-Update
Glyma.13G094900 No alias Xyloglucan endotransglucosylase/hydrolase family protein 0.07 Orthogroups_2024-Update
Glyma.15G169100 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Glyma.17G065000 No alias xyloglucan endotransglycosylase 6 0.02 Orthogroups_2024-Update
Glyma.17G065200 No alias xyloglucan endotransglycosylase 6 0.02 Orthogroups_2024-Update
Glyma.17G065300 No alias xyloglucan endotransglycosylase 6 0.04 Orthogroups_2024-Update
Glyma.17G157400 No alias xyloglucan endotransglucosylase/hydrolase 6 0.06 Orthogroups_2024-Update
Glyma.18G106500 No alias xyloglucan endotransglucosylase/hydrolase 15 0.03 Orthogroups_2024-Update
LOC_Os06g22919 No alias DEFL9 - Defensin and Defensin-like DEFL family, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g39840 No alias glycosyl hydrolases family 16, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429607g0020 No alias (p35694|bru1_soybn : 341.0) Brassinosteroid-regulated... 0.04 Orthogroups_2024-Update
MA_10430695g0010 No alias (p35694|bru1_soybn : 327.0) Brassinosteroid-regulated... 0.07 Orthogroups_2024-Update
MA_10430703g0010 No alias (p35694|bru1_soybn : 343.0) Brassinosteroid-regulated... 0.06 Orthogroups_2024-Update
MA_10432086g0010 No alias (p35694|bru1_soybn : 353.0) Brassinosteroid-regulated... 0.03 Orthogroups_2024-Update
MA_10432086g0020 No alias (p35694|bru1_soybn : 289.0) Brassinosteroid-regulated... 0.08 Orthogroups_2024-Update
MA_10433908g0010 No alias (at4g03210 : 268.0) encodes a member of xyloglucan... 0.04 Orthogroups_2024-Update
MA_10434153g0020 No alias (q41638|xtha_phaan : 378.0) Xyloglucan... 0.03 Orthogroups_2024-Update
MA_11177g0010 No alias (at5g57550 : 312.0) xyloglucan... 0.06 Orthogroups_2024-Update
MA_328340g0010 No alias (at4g03210 : 285.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
MA_3306g0010 No alias (at5g65730 : 215.0) xyloglucan... 0.05 Orthogroups_2024-Update
MA_476450g0010 No alias (at5g65730 : 440.0) xyloglucan... 0.03 Orthogroups_2024-Update
MA_926271g0010 No alias (at2g36870 : 160.0) xyloglucan... 0.03 Orthogroups_2024-Update
MA_96657g0010 No alias (at5g57550 : 317.0) xyloglucan... 0.06 Orthogroups_2024-Update
PSME_00001206-RA No alias (at4g03210 : 299.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00009508-RA No alias (at5g13870 : 295.0) EXGT-A4, endoxyloglucan... 0.04 Orthogroups_2024-Update
PSME_00009509-RA No alias (at5g57530 : 295.0) xyloglucan... 0.05 Orthogroups_2024-Update
PSME_00013047-RA No alias (q41638|xtha_phaan : 220.0) Xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00047378-RA No alias (at4g25810 : 342.0) xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00047577-RA No alias (at4g03210 : 346.0) encodes a member of xyloglucan... 0.04 Orthogroups_2024-Update
Potri.002G244200 No alias xyloglucan endotransglucosylase/hydrolase 2 0.03 Orthogroups_2024-Update
Potri.007G008500 No alias xyloglucan endotransglucosylase/hydrolase 6 0.03 Orthogroups_2024-Update
Potri.013G005700 No alias xyloglucan endotransglycosylase 6 0.02 Orthogroups_2024-Update
Potri.018G095100 No alias xyloglucan endotransglycosylase 6 0.04 Orthogroups_2024-Update
Pp1s168_29V6 No alias xyloglucan endotransglycosylase 0.02 Orthogroups_2024-Update
Pp1s168_54V6 No alias xyloglucan endotransglucosylase hydrolase protein a 0.02 Orthogroups_2024-Update
Pp1s309_36V6 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.02 Orthogroups_2024-Update
Pp1s309_38V6 No alias xyloglucan endotransglycosylase 0.02 Orthogroups_2024-Update
Pp1s309_41V6 No alias xyloglucan endotransglucosylase hydrolase protein a 0.03 Orthogroups_2024-Update
Sobic.001G309000.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.03 Orthogroups_2024-Update
Solyc03g093080 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc03g093110 No alias xyloglucan endotransglucosylase-hydrolase 0.03 Orthogroups_2024-Update
Solyc03g093120 No alias xyloglucan endotransglucosylase-hydrolase 0.04 Orthogroups_2024-Update
Solyc03g093130 No alias xyloglucan endotransglucosylase-hydrolase 3 0.05 Orthogroups_2024-Update
Solyc07g055990 No alias Xyloglucan endotransglucosylase/hydrolase 7 (AHRD V1... 0.03 Orthogroups_2024-Update
Solyc07g056000 No alias xyloglycan endo-transglycosylase 0.04 Orthogroups_2024-Update
Sopen03g023900 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update
Sopen03g023920 No alias Glycosyl hydrolases family 16 0.02 Orthogroups_2024-Update
Sopen07g026530 No alias Glycosyl hydrolases family 16 0.04 Orthogroups_2024-Update
Sopen07g029350 No alias Glycosyl hydrolases family 16 0.02 Orthogroups_2024-Update
Sopen11g026010 No alias Glycosyl hydrolases family 16 0.02 Orthogroups_2024-Update
Sopen12g008060 No alias Glycosyl hydrolases family 16 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
BP GO:0006073 cellular glucan metabolic process IEA InterProScan predictions
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA InterProScan predictions
CC GO:0048046 apoplast IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010713 XET_C 319 363
IPR000757 GH16 118 303
No external refs found!