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  5. PSME_00033210-RA

PSME_00033210-RA


Description : (at3g16240 : 295.0) Delta tonoplast intrinsic protein, functions as a water channel and ammonium (NH3) transporter. Highly expressed in flower, shoot, and stem. Expression shows diurnal regulation and is induced by ammonium (NH3). Protein localized to vacuolar membrane.; delta tonoplast integral protein (DELTA-TIP); FUNCTIONS IN: water channel activity, ammonia transmembrane transporter activity, urea transmembrane transporter activity, methylammonium transmembrane transporter activity; INVOLVED IN: transport, urea transport, water transport; LOCATED IN: in 10 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2;3 (TAIR:AT5G47450.1); Has 10937 Blast hits to 10900 proteins in 2182 species: Archae - 87; Bacteria - 5160; Metazoa - 1503; Fungi - 423; Plants - 2497; Viruses - 0; Other Eukaryotes - 1267 (source: NCBI BLink). & (p21653|tip1_tobac : 291.0) Probable aquaporin TIP-type RB7-5A (Tonoplast intrinsic protein, root-specific RB7-5A) (TobRB7) (RT-TIP) - Nicotiana tabacum (Common tobacco) & (reliability: 590.0) & (original description: no original description)


Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00033210-RA
Cluster HCCA clusters: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
165030 No alias tonoplast intrinsic protein 2;3 0.04 Orthogroups_2024-Update
A4A49_03881 No alias putative aquaporin tip-type rb7-18c 0.03 Orthogroups_2024-Update
A4A49_15174 No alias aquaporin tip2-1 0.03 Orthogroups_2024-Update
At3g26520 No alias Aquaporin TIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q41963] 0.02 Orthogroups_2024-Update
Bradi2g62520 No alias tonoplast intrinsic protein 1;3 0.03 Orthogroups_2024-Update
GRMZM2G056908 No alias tonoplast intrinsic protein 2;3 0.02 Orthogroups_2024-Update
GRMZM2G103983 No alias Aquaporin-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G333100 No alias tonoplast intrinsic protein 1;3 0.05 Orthogroups_2024-Update
HORVU7Hr1G081770.1 No alias tonoplast intrinsic protein *(TIP) 0.02 Orthogroups_2024-Update
LOC_Os03g05290 No alias aquaporin protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_175978g0010 No alias (at2g36830 : 337.0) Encodes a tonoplast intrinsic... 0.03 Orthogroups_2024-Update
MA_467865g0010 No alias (at3g16240 : 316.0) Delta tonoplast intrinsic protein,... 0.06 Orthogroups_2024-Update
PSME_00009069-RA No alias (at2g36830 : 317.0) Encodes a tonoplast intrinsic... 0.03 Orthogroups_2024-Update
PSME_00017221-RA No alias (at2g36830 : 177.0) Encodes a tonoplast intrinsic... 0.03 Orthogroups_2024-Update
Potri.001G235300 No alias tonoplast intrinsic protein 1;3 0.02 Orthogroups_2024-Update
Potri.009G027200 No alias tonoplast intrinsic protein 1;3 0.03 Orthogroups_2024-Update
Potri.T156000 No alias gamma tonoplast intrinsic protein 0.02 Orthogroups_2024-Update
Seita.4G160700.1 No alias tonoplast intrinsic protein *(TIP) 0.03 Orthogroups_2024-Update
Seita.9G541300.1 No alias tonoplast intrinsic protein *(TIP) 0.04 Orthogroups_2024-Update
Sobic.001G505100.1 No alias tonoplast intrinsic protein *(TIP) 0.04 Orthogroups_2024-Update
Solyc10g083880 No alias tonoplast intrinsic protein 1.3 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 17 234
IPR000425 MIP 244 461
No external refs found!