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  5. PSME_00033211-RA

PSME_00033211-RA


Description : (at3g16240 : 306.0) Delta tonoplast intrinsic protein, functions as a water channel and ammonium (NH3) transporter. Highly expressed in flower, shoot, and stem. Expression shows diurnal regulation and is induced by ammonium (NH3). Protein localized to vacuolar membrane.; delta tonoplast integral protein (DELTA-TIP); FUNCTIONS IN: water channel activity, ammonia transmembrane transporter activity, urea transmembrane transporter activity, methylammonium transmembrane transporter activity; INVOLVED IN: transport, urea transport, water transport; LOCATED IN: in 10 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2;3 (TAIR:AT5G47450.1); Has 10937 Blast hits to 10900 proteins in 2182 species: Archae - 87; Bacteria - 5160; Metazoa - 1503; Fungi - 423; Plants - 2497; Viruses - 0; Other Eukaryotes - 1267 (source: NCBI BLink). & (p21653|tip1_tobac : 295.0) Probable aquaporin TIP-type RB7-5A (Tonoplast intrinsic protein, root-specific RB7-5A) (TobRB7) (RT-TIP) - Nicotiana tabacum (Common tobacco) & (reliability: 612.0) & (original description: no original description)


Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00033211-RA
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
A4A49_03881 No alias putative aquaporin tip-type rb7-18c 0.03 Orthogroups_2024-Update
A4A49_19923 No alias aquaporin tip2-1 0.03 Orthogroups_2024-Update
Brara.K01694.1 No alias tonoplast intrinsic protein *(TIP) 0.03 Orthogroups_2024-Update
LOC_Os02g44080 No alias aquaporin protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp6g11750.1 No alias tonoplast intrinsic protein (TIP) 0.03 Orthogroups_2024-Update
Potri.001G235300 No alias tonoplast intrinsic protein 1;3 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 17 234
No external refs found!