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  5. Solyc02g070070

Solyc02g070070


Description : FAD-binding Berberine family protein (AHRD V3.3 *** AT2G34790.1)


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g070070
Cluster HCCA clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
A4A49_21867 No alias flavin-dependent oxidoreductase fox1 0.04 Orthogroups_2024-Update
AC203909.3_FG007 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
At1g26410 No alias Berberine bridge enzyme-like 6... 0.03 Orthogroups_2024-Update
At1g26420 No alias Berberine bridge enzyme-like 7... 0.03 Orthogroups_2024-Update
Bradi3g09380 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Brara.G00508.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Brara.G00588.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Glyma.04G113500 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.05G122000 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.08G080000 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Glyma.08G080100 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.09G027300 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.15G133200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G091500.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
HORVU7Hr1G089270.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Kfl00307_0010 kfl00307_0010_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os08g06180 No alias reticuline oxidase precursor, putative 0.03 Orthogroups_2024-Update
PSME_00033064-RA No alias (at4g20860 : 370.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
Potri.001G440700 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G459200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Seita.4G178600.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Sobic.010G163000.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Solyc02g079450 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2) 0.03 Orthogroups_2024-Update
Sopen03g002700 No alias Berberine and berberine like 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005047 signal recognition particle binding IEP Predicted GO
CC GO:0005785 signal recognition particle receptor complex IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR012951 BBE 473 528
IPR006094 Oxid_FAD_bind_N 79 217
No external refs found!