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  5. PSME_00033256-RA

PSME_00033256-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00033256-RA
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
A4A49_62388 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Glyma.15G187500 No alias hAT dimerisation domain-containing protein 0.03 Orthogroups_2024-Update
LOC_Os07g15420 No alias transposon protein, putative, Ac/Ds sub-class, expressed 0.02 Orthogroups_2024-Update
PSME_00000841-RA No alias (at3g10050 : 81.3) first enzyme in the biosynthetic... 0.04 Orthogroups_2024-Update
PSME_00002788-RA No alias (at4g05160 : 161.0) Encodes a peroxisomal protein... 0.03 Orthogroups_2024-Update
PSME_00011286-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00013206-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00016751-RA No alias (at1g79740 : 133.0) hAT transposon superfamily;... 0.04 Orthogroups_2024-Update
PSME_00021433-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00025767-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00033581-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00039066-RA No alias (at3g17450 : 92.8) hAT dimerisation domain-containing... 0.02 Orthogroups_2024-Update
PSME_00055084-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00055841-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.004G193600 No alias Function unknown 0.03 Orthogroups_2024-Update
Solyc06g030510 No alias hAT transposon superfamily (AHRD V3.3 *** AT4G15020.2) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0008156 negative regulation of DNA replication IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0048478 replication fork protection IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0051053 negative regulation of DNA metabolic process IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!