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  5. PSME_00033285-RA

PSME_00033285-RA


Description : (at1g77380 : 478.0) Amino acid permease which transports basic amino acids.; amino acid permease 3 (AAP3); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 2 (TAIR:AT5G09220.1); Has 2346 Blast hits to 2332 proteins in 227 species: Archae - 0; Bacteria - 15; Metazoa - 394; Fungi - 322; Plants - 1373; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (reliability: 956.0) & (original description: no original description)


Gene families : OG_42_0000170 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00033285-RA

Target Alias Description ECC score Gene Family Method Actions
Bradi4g41040 No alias amino acid permease 4 0.03 Orthogroups_2024-Update
GRMZM2G092945 No alias amino acid permease 5 0.05 Orthogroups_2024-Update
LOC_Os04g41350 No alias amino acid transporter, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g56470 No alias amino acid transporter, putative, expressed 0.02 Orthogroups_2024-Update
MA_14300g0010 No alias (at5g09220 : 529.0) member of AAAP family; amino acid... 0.03 Orthogroups_2024-Update
Potri.002G079400 No alias amino acid permease 3 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 31 464
No external refs found!