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  5. PSME_00033372-RA

PSME_00033372-RA


Description : (at2g36830 : 336.0) Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems.; gamma tonoplast intrinsic protein (GAMMA-TIP); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2 (TAIR:AT3G26520.1); Has 11016 Blast hits to 10983 proteins in 2213 species: Archae - 82; Bacteria - 5238; Metazoa - 1501; Fungi - 451; Plants - 2489; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (p50156|tip11_orysa : 321.0) Probable aquaporin TIP1.1 (Tonoplast intrinsic protein 1.1) (OsTIP1.1) (rTIP1) - Oryza sativa (Rice) & (reliability: 672.0) & (original description: no original description)


Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00033372-RA
Cluster HCCA clusters: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
Brara.F03268.1 No alias tonoplast intrinsic protein *(TIP) 0.02 Orthogroups_2024-Update
Glyma.01G208200 No alias tonoplast intrinsic protein 2;3 0.02 Orthogroups_2024-Update
Glyma.08G203000 No alias delta tonoplast integral protein 0.04 Orthogroups_2024-Update
Glyma.13G146300 No alias gamma tonoplast intrinsic protein 0.04 Orthogroups_2024-Update
LOC_Os01g13120 No alias aquaporin protein, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s44_31V6 No alias mip tip subfamily 0.03 Orthogroups_2024-Update
Seita.7G175600.1 No alias tonoplast intrinsic protein *(TIP) 0.01 Orthogroups_2024-Update
Sobic.006G170600.1 No alias tonoplast intrinsic protein *(TIP) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000425 MIP 27 244
No external refs found!