1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00033443-RA

PSME_00033443-RA


Description : (at2g23540 : 394.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 3581 Blast hits to 3540 proteins in 243 species: Archae - 0; Bacteria - 373; Metazoa - 0; Fungi - 51; Plants - 3139; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (p40603|apg_brana : 151.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 788.0) & (original description: no original description)


Gene families : OG_42_0000097 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000097_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00033443-RA
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
129215 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
403921 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.05 Orthogroups_2024-Update
A4A49_00171 No alias gdsl esteraselipase 0.05 Orthogroups_2024-Update
A4A49_04222 No alias gdsl esteraselipase 0.03 Orthogroups_2024-Update
A4A49_19472 No alias gdsl esteraselipase 0.04 Orthogroups_2024-Update
At1g71691 No alias GDSL esterase/lipase At1g71691... 0.02 Orthogroups_2024-Update
At4g16230 No alias GDSL-like Lipase/Acylhydrolase superfamily protein... 0.03 Orthogroups_2024-Update
At5g08460 No alias GDSL esterase/lipase At5g08460... 0.04 Orthogroups_2024-Update
At5g15720 No alias GDSL esterase/lipase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFJ9] 0.04 Orthogroups_2024-Update
At5g41890 No alias GDSL-like Lipase/Acylhydrolase superfamily protein... 0.03 Orthogroups_2024-Update
At5g45670 No alias GDSL esterase/lipase At5g45670... 0.03 Orthogroups_2024-Update
Bradi1g30034 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 Orthogroups_2024-Update
Bradi2g48760 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.08 Orthogroups_2024-Update
Bradi2g49781 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g39622 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.1 Orthogroups_2024-Update
Brara.A02138.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D01402.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G01533.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.G02415.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.G03036.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I04527.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G062577 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G101117 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G132331 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G163400 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os01g52770 No alias GDSL-like lipase/acylhydrolase, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os05g44200 No alias GDSL-like lipase/acylhydrolase, putative, expressed 0.06 Orthogroups_2024-Update
MA_10434622g0020 No alias (at2g23540 : 402.0) GDSL-like Lipase/Acylhydrolase... 0.09 Orthogroups_2024-Update
MA_117003g0010 No alias (at5g41890 : 378.0) GDSL-like Lipase/Acylhydrolase... 0.03 Orthogroups_2024-Update
PSME_00037279-RA No alias (at5g15720 : 226.0) Contains lipase signature motif and... 0.04 Orthogroups_2024-Update
PSME_00039938-RA No alias (at5g15720 : 152.0) Contains lipase signature motif and... 0.05 Orthogroups_2024-Update
Potri.004G064500 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.08 Orthogroups_2024-Update
Potri.013G102400 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G008100 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G088800 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G005400 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.05 Orthogroups_2024-Update
Potri.019G009200 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 Orthogroups_2024-Update
Pp1s155_50V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Pp1s28_368V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Pp1s341_90V6 No alias anther-specific proline-rich protein apg 0.01 Orthogroups_2024-Update
Pp1s36_315V6 No alias zinc finger 0.04 Orthogroups_2024-Update
Pp1s7_65V6 No alias zinc finger 0.04 Orthogroups_2024-Update
Seita.2G165400.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.4G166400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G166500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G317400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G409000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G433000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G187300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g071610 No alias GDSL-lipase protein (AHRD V3.3 *** Q08ET5_CAPAN) 0.04 Orthogroups_2024-Update
Solyc02g071710 No alias Lipase, GDSL (AHRD V3.3 *** A0A124S9Z4_CYNCS) 0.02 Orthogroups_2024-Update
Solyc06g064820 No alias GDSL esterase/lipase (AHRD V3.3 *** W9S0Q7_9ROSA) 0.02 Orthogroups_2024-Update
Sopen02g020630 No alias GDSL-like Lipase/Acylhydrolase 0.02 Orthogroups_2024-Update
Sopen02g020650 No alias GDSL-like Lipase/Acylhydrolase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001087 GDSL 39 355
No external refs found!