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  5. PSME_00033509-RA

PSME_00033509-RA


Description : (at3g10260 : 192.0) Reticulon family protein; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 1060 Blast hits to 1060 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 0; Plants - 458; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 384.0) & (original description: no original description)


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00033509-RA
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G082010.2 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
MA_58851g0010 No alias (at3g10260 : 256.0) Reticulon family protein; CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00034093-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.002G055600 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
Seita.7G086000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.04 Orthogroups_2024-Update
Seita.9G067600.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Solyc08g081730 No alias Reticulon-like protein (AHRD V3.3 *** K4CPG9_SOLLC) 0.02 Orthogroups_2024-Update
Sopen06g015420 No alias Reticulon 0.03 Orthogroups_2024-Update
evm.model.contig_2198.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003388 Reticulon 36 166
No external refs found!