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  5. PSME_00033595-RA

PSME_00033595-RA


Description : (at5g16750 : 473.0) Encodes a nucleolar localized WD-40 repeat protein that is preferentially expressed in dividing cells and is required for regulated division planes and embryo development.; TORMOZEMBRYO DEFECTIVE (TOZ); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp13 (InterPro:IPR013934), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 153281 Blast hits to 38108 proteins in 953 species: Archae - 96; Bacteria - 13855; Metazoa - 64321; Fungi - 32637; Plants - 21715; Viruses - 0; Other Eukaryotes - 20657 (source: NCBI BLink). & (reliability: 946.0) & (original description: no original description)


Gene families : OG_42_0001305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00033595-RA

Target Alias Description ECC score Gene Family Method Actions
PSME_00000767-RA No alias (at5g16750 : 375.0) Encodes a nucleolar localized WD-40... 0.03 Orthogroups_2024-Update
PSME_00015409-RA No alias (at5g16750 : 185.0) Encodes a nucleolar localized WD-40... 0.03 Orthogroups_2024-Update
PSME_00025372-RA No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
PSME_00032106-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 336 364
IPR001680 WD40_repeat 239 276
IPR001680 WD40_repeat 299 329
IPR001680 WD40_repeat 369 406
IPR001680 WD40_repeat 4 41
No external refs found!