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- Pseudotsuga menziesii
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- PSME_00033743-RA
PSME_00033743-RA
Description : (at1g60070 : 161.0) Adaptor protein complex AP-1, gamma subunit; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, Golgi apparatus part, Golgi apparatus, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-1, gamma subunit (InterPro:IPR017107), Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, gamma-adaptin, appendage (InterPro:IPR008153), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: gamma-adaptin 1 (TAIR:AT1G23900.2). & (reliability: 322.0) & (original description: no original description)
Expression Profile
Attention: This gene has low abundance.
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Pseudotsuga release: PSME_00033743-RA | |
| Cluster | HCCA clusters: Cluster_97 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| Cre16.g676650 | No alias | Adaptor protein complex AP-1, gamma subunit | 0.03 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| CC | GO:0005575 | cellular_component | None | Extended |
| BP | GO:0006810 | transport | None | Extended |
| BP | GO:0006886 | intracellular protein transport | IEA | InterProScan predictions |
| BP | GO:0008104 | protein localization | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0015031 | protein transport | None | Extended |
| BP | GO:0015833 | peptide transport | None | Extended |
| BP | GO:0016192 | vesicle-mediated transport | IEA | InterProScan predictions |
| CC | GO:0030117 | membrane coat | IEA | InterProScan predictions |
| CC | GO:0032991 | protein-containing complex | None | Extended |
| BP | GO:0033036 | macromolecule localization | None | Extended |
| BP | GO:0042886 | amide transport | None | Extended |
| CC | GO:0044424 | intracellular part | None | Extended |
| CC | GO:0044425 | membrane part | None | Extended |
| CC | GO:0044444 | cytoplasmic part | None | Extended |
| CC | GO:0044464 | cell part | None | Extended |
| BP | GO:0045184 | establishment of protein localization | None | Extended |
| BP | GO:0046907 | intracellular transport | None | Extended |
| BP | GO:0051179 | localization | None | Extended |
| BP | GO:0051234 | establishment of localization | None | Extended |
| BP | GO:0051641 | cellular localization | None | Extended |
| BP | GO:0051649 | establishment of localization in cell | None | Extended |
| BP | GO:0071702 | organic substance transport | None | Extended |
| BP | GO:0071705 | nitrogen compound transport | None | Extended |
| CC | GO:0098796 | membrane protein complex | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Predicted GO |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Predicted GO |
| BP | GO:0006813 | potassium ion transport | IEP | Predicted GO |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Predicted GO |
| MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Predicted GO |
| BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Predicted GO |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Predicted GO |
| MF | GO:0051540 | metal cluster binding | IEP | Predicted GO |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Predicted GO |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
| MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR002553 | Clathrin/coatomer_adapt-like_N | 5 | 119 |
