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  5. PSME_00033809-RA

PSME_00033809-RA


Description : (at3g63240 : 505.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 2363 Blast hits to 2040 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 816; Fungi - 600; Plants - 662; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink). & (reliability: 1010.0) & (original description: no original description)


Gene families : OG_42_0000152 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00033809-RA
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
53402 No alias DNAse I-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.01G235300 No alias CVP2 like 1 0.04 Orthogroups_2024-Update
Glyma.05G070400 No alias myo-inositol polyphosphate 5-phosphatase 2 0.03 Orthogroups_2024-Update
PSME_00006478-RA No alias (at3g63240 : 452.0) DNAse I-like superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.002G063500 No alias DNAse I-like superfamily protein 0.02 Orthogroups_2024-Update
Sobic.001G244900.1 No alias type-I inositol-polyphosphate 5-phosphatase & EC_3.1... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 90 522
No external refs found!