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  5. Solyc02g070110

Solyc02g070110


Description : FAD-binding Berberine family protein (AHRD V3.3 *** A0A061GF79_THECC)


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g070110
Cluster HCCA clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g41350 No alias FAD-binding domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00002246-RA No alias (at5g44400 : 385.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00002247-RA No alias (at5g44400 : 388.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
Potri.019G063400 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Solyc02g070090 No alias FAD-binding Berberine family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen02g019250 No alias Berberine and berberine like 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 75 211
IPR012951 BBE 469 526
No external refs found!