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  5. PSME_00033876-RA

PSME_00033876-RA


Description : (at4g36380 : 203.0) Encodes a cytochrome P-450 gene that is involved in leaf blade expansion by controlling polar cell expansion in the leaf length direction. Member of the CYP90C CYP450 family. ROT3 was shown to be involved in brassinosteroid biosynthesis, most likely in the conversion step of typhasterol (TY) to castasterone (CS). As 6-deoxo-CS was unable to restore the phenotype of rot3-1, it has been postulated that ROT3 might be specifically involved in the conversion of TY to CS in the C6-oxidation pathway of brassinolide. Recently, CYP90C1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates).; ROTUNDIFOLIA 3 (ROT3); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 90, subfamily D, polypeptide 1 (TAIR:AT3G13730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8gsq1|c85a1_orysa : 196.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (reliability: 388.0) & (original description: no original description)


Gene families : OG_42_0000020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00033876-RA
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
103517 No alias ent-kaurenoic acid hydroxylase 2 0.03 Orthogroups_2024-Update
231370 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
431878 No alias cytochrome P450, family 88, subfamily A, polypeptide 3 0.02 Orthogroups_2024-Update
Bradi3g35840 No alias cytochrome P450, family 87, subfamily A, polypeptide 2 0.02 Orthogroups_2024-Update
Bradi5g18780 No alias cytochrome P450, family 87, subfamily A, polypeptide 2 0.02 Orthogroups_2024-Update
Brara.A00215.1 No alias 3-epi-6-deoxocathasterone 23-monooxygenase & EC_1.14... 0.03 Orthogroups_2024-Update
Glyma.02G083200 No alias cytochrome P450, family 707, subfamily A, polypeptide 3 0.03 Orthogroups_2024-Update
Glyma.16G168900 No alias cytochrome P450, family 707, subfamily A, polypeptide 3 0.02 Orthogroups_2024-Update
HORVU3Hr1G018860.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os07g33620 No alias cytochrome P450 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_607123g0010 No alias (q94iw5|c90d2_orysa : 121.0) Cytochrome P450 90D2 (EC... 0.03 Orthogroups_2024-Update
Potri.002G060700 No alias cytochrome P450, family 718 0.02 Orthogroups_2024-Update
Potri.002G126100 No alias cytochrome P450, family 707, subfamily A, polypeptide 4 0.03 Orthogroups_2024-Update
Potri.014G029100 No alias cytochrome P450, family 707, subfamily A, polypeptide 4 0.03 Orthogroups_2024-Update
Potri.019G080500 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.02 Orthogroups_2024-Update
Seita.5G139200.1 No alias 3-epi-6-deoxocathasterone 23-monooxygenase & EC_1.14... 0.03 Orthogroups_2024-Update
Sobic.002G320200.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sopen08g003800 No alias Cytochrome P450 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0004150 dihydroneopterin aldolase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 49 356
No external refs found!