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PSME_00034019-RA


Description : (at2g20110 : 131.0) Tesmin/TSO1-like CXC domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT4G29000.1); Has 1016 Blast hits to 700 proteins in 97 species: Archae - 0; Bacteria - 2; Metazoa - 306; Fungi - 3; Plants - 316; Viruses - 1; Other Eukaryotes - 388 (source: NCBI BLink). & (reliability: 262.0) & (original description: no original description)


Gene families : OG_42_0001436 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034019-RA
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
At3g16160 No alias Protein tesmin/TSO1-like CXC 8... 0.01 Orthogroups_2024-Update
Brara.A03075.1 No alias TCX/CPP-type transcription factor & component *(TCX5/6)... 0.01 Orthogroups_2024-Update
HORVU7Hr1G081540.1 No alias TCX/CPP-type transcription factor & component *(TCX5/6)... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR005172 CRC 194 228
No external refs found!