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  5. PSME_00034035-RA

PSME_00034035-RA


Description : (at4g19850 : 81.3) encodes a protein similar to phloem protein 2 in cucumber. a member of a large gene family.; lectin-related; FUNCTIONS IN: carbohydrate binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: phloem; BEST Arabidopsis thaliana protein match is: phloem protein 2-A1 (TAIR:AT4G19840.1); Has 510 Blast hits to 505 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 510; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description)


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034035-RA
Cluster HCCA clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
At2g02340 No alias Putative F-box protein PP2-B8... 0.06 Orthogroups_2024-Update
Bradi3g54987 No alias phloem protein 2-B12 0.03 Orthogroups_2024-Update
Bradi3g55000 No alias phloem protein 2-B14 0.02 Orthogroups_2024-Update
Brara.B03101.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.03G253900 No alias phloem protein 2-B1 0.04 Orthogroups_2024-Update
Mp3g22930.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Seita.6G063500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G231200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G340632.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G340700.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 10 136
No external refs found!