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  5. PSME_00034046-RA

PSME_00034046-RA


Description : (at5g52450 : 344.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 688.0) & (original description: no original description)


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034046-RA
Cluster HCCA clusters: Cluster_388

Target Alias Description ECC score Gene Family Method Actions
At1g66760 No alias Protein DETOXIFICATION 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9M8] 0.03 Orthogroups_2024-Update
At1g66780 No alias Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W985] 0.04 Orthogroups_2024-Update
At3g23560 No alias Protein DETOXIFICATION 19... 0.03 Orthogroups_2024-Update
At5g52450 No alias Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3] 0.03 Orthogroups_2024-Update
Bradi1g26800 No alias MATE efflux family protein 0.04 Orthogroups_2024-Update
Bradi1g42390 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Bradi2g46750 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Bradi5g07160 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Brara.A02640.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Brara.G00534.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Brara.J00777.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
GRMZM2G120563 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
GRMZM2G133006 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
GRMZM2G161809 No alias MATE efflux family protein 0.04 Orthogroups_2024-Update
GRMZM2G166459 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Glyma.10G267400 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Glyma.10G267700 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Glyma.13G275400 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Glyma.20G123500 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G022350.6 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
HORVU7Hr1G112340.13 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
LOC_Os04g30490 No alias MATE efflux family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g11354 No alias MATE efflux family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10162615g0010 No alias (at5g52450 : 418.0) MATE efflux family protein;... 0.03 Orthogroups_2024-Update
MA_14711g0010 No alias (at5g52450 : 528.0) MATE efflux family protein;... 0.03 Orthogroups_2024-Update
MA_4390g0010 No alias (at5g52450 : 436.0) MATE efflux family protein;... 0.03 Orthogroups_2024-Update
PSME_00045335-RA No alias (at1g71140 : 150.0) MATE efflux family protein;... 0.06 Orthogroups_2024-Update
Potri.008G126500 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Seita.5G156500.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Seita.5G333100.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Seita.7G064200.1 No alias metabolite transporter *(DTX) 0.01 Orthogroups_2024-Update
Sobic.004G129800.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Sopen02g035720 No alias MatE 0.03 Orthogroups_2024-Update
Sopen05g004350 No alias MatE 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 178 303
IPR002528 MATE_fam 3 116
No external refs found!