1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00034091-RA

PSME_00034091-RA


Description : (at4g39700 : 168.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1218 Blast hits to 1176 proteins in 83 species: Archae - 0; Bacteria - 23; Metazoa - 6; Fungi - 46; Plants - 1141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description)


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034091-RA
Cluster HCCA clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
At3g56240 No alias Copper transport protein CCH... 0.03 Orthogroups_2024-Update
Brara.I03269.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.08G072700 No alias Heavy metal transport/detoxification superfamily protein 0.05 Orthogroups_2024-Update
Glyma.19G001000 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G114920.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G040920.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G112560.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G009000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g03490 No alias heavy-metal-associated domain-containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os09g20000 No alias heavy metal-associated domain containing protein, expressed 0.02 Orthogroups_2024-Update
Mp2g12470.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.014G132000 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Pp1s57_17V6 No alias metal ion binding 0.02 Orthogroups_2024-Update
Pp1s81_75V6 No alias heavy metal-associated domain containing expressed 0.03 Orthogroups_2024-Update
Solyc05g055310 No alias Heavy metal transport/detoxification superfamily protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006121 HMA_dom 28 83
No external refs found!