- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
No description available
Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc02g070130 | |
| Cluster | HCCA clusters: Cluster_301 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g26410 | No alias | Berberine bridge enzyme-like 6... | 0.03 | Orthogroups_2024-Update | |
| At4g20800 | No alias | Berberine bridge enzyme-like 17... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g38250 | No alias | FAD-binding Berberine family protein | 0.02 | Orthogroups_2024-Update | |
| Brara.A01131.1 | No alias | EC_1.1 oxidoreductase acting on CH-OH group of donor | 0.04 | Orthogroups_2024-Update | |
| Brara.A01152.1 | No alias | EC_1.1 oxidoreductase acting on CH-OH group of donor | 0.03 | Orthogroups_2024-Update | |
| Brara.D02108.1 | No alias | EC_1.1 oxidoreductase acting on CH-OH group of donor | 0.03 | Orthogroups_2024-Update | |
| Brara.G00508.1 | No alias | EC_1.1 oxidoreductase acting on CH-OH group of donor | 0.03 | Orthogroups_2024-Update | |
| Brara.G01552.1 | No alias | EC_1.1 oxidoreductase acting on CH-OH group of donor | 0.04 | Orthogroups_2024-Update | |
| Glyma.05G124900 | No alias | FAD-binding Berberine family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.08G059000 | No alias | FAD-binding Berberine family protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.08G080200 | No alias | FAD-binding Berberine family protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.09G028300 | No alias | FAD-binding Berberine family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.15G133200 | No alias | FAD-binding Berberine family protein | 0.04 | Orthogroups_2024-Update | |
| HORVU2Hr1G021740.1 | No alias | EC_1.1 oxidoreductase acting on CH-OH group of donor | 0.03 | Orthogroups_2024-Update | |
| LOC_Os06g35560 | No alias | reticuline oxidase-like protein precursor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| Potri.001G459100 | No alias | FAD-binding Berberine family protein | 0.03 | Orthogroups_2024-Update | |
| Potri.001G464800 | No alias | FAD-binding Berberine family protein | 0.03 | Orthogroups_2024-Update | |
| Potri.019G063400 | No alias | FAD-binding Berberine family protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s128_133V6 | No alias | fad-binding protein | 0.02 | Orthogroups_2024-Update | |
| Sobic.010G162700.1 | No alias | EC_1.1 oxidoreductase acting on CH-OH group of donor | 0.03 | Orthogroups_2024-Update | |
| Solyc02g022860 | No alias | FAD-binding Berberine family protein, putative (AHRD... | 0.04 | Orthogroups_2024-Update | |
| Solyc02g079450 | No alias | FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2) | 0.04 | Orthogroups_2024-Update | |
| Sopen02g019280 | No alias | FAD binding domain | 0.03 | Orthogroups_2024-Update | |
| Sopen02g024240 | No alias | FAD binding domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004615 | phosphomannomutase activity | IEP | Predicted GO |
| MF | GO:0004650 | polygalacturonase activity | IEP | Predicted GO |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
| BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | Predicted GO |
| BP | GO:0009226 | nucleotide-sugar biosynthetic process | IEP | Predicted GO |
| BP | GO:0009298 | GDP-mannose biosynthetic process | IEP | Predicted GO |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Predicted GO |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
| BP | GO:0019673 | GDP-mannose metabolic process | IEP | Predicted GO |
| MF | GO:0030234 | enzyme regulator activity | IEP | Predicted GO |
| MF | GO:0030570 | pectate lyase activity | IEP | Predicted GO |
| MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
| BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Predicted GO |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Predicted GO |
| BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |