1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00034186-RA

PSME_00034186-RA


Description : (at3g17940 : 216.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G47800.1); Has 4707 Blast hits to 4700 proteins in 1470 species: Archae - 28; Bacteria - 3220; Metazoa - 276; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 707 (source: NCBI BLink). & (reliability: 432.0) & (original description: no original description)


Gene families : OG_42_0000588 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000588_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034186-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_36877 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Kfl00139_0140 kfl00139_0140_v1.1 (at3g17940 : 347.0) Galactose mutarotase-like... 0.02 Orthogroups_2024-Update
Mp5g20990.1 No alias no hits & (original description: none) 0.01 Orthogroups_2024-Update
Potri.012G128800 No alias Galactose mutarotase-like superfamily protein 0.02 Orthogroups_2024-Update
Sobic.006G105100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
MF GO:0016853 isomerase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR008183 Aldose_1/G6P_1-epimerase 8 221
No external refs found!