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  5. PSME_00034352-RA

PSME_00034352-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000282 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000282_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034352-RA

Target Alias Description ECC score Gene Family Method Actions
At5g52740 No alias Heavy metal-associated isoprenylated plant protein 12... 0.03 Orthogroups_2024-Update
Bradi1g76770 No alias Copper transport protein family 0.03 Orthogroups_2024-Update
Glyma.09G130500 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G235700 No alias Copper transport protein family 0.02 Orthogroups_2024-Update
Glyma.16G178100 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G118050.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G083100.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G001490.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g57200 No alias heavy metal transport/detoxification protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g38870 No alias heavy metal-associated domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_18139g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_867509g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00012691-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00017012-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00034353-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00047413-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.003G125100 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G089700 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G147000 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Sobic.001G535200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc03g025800 No alias Heavy metal-associated domain, putative (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc06g036310 No alias Heavy metal transport/detoxification superfamily protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 7 62
No external refs found!