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  5. PSME_00034365-RA

PSME_00034365-RA


Description : (p52578|ifrh_soltu : 269.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (at4g39230 : 267.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 534.0) & (original description: no original description)


Gene families : OG_42_0000162 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034365-RA
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
At1g75280 No alias Isoflavone reductase homolog P3... 0.06 Orthogroups_2024-Update
Bradi4g39269 No alias pinoresinol reductase 1 0.02 Orthogroups_2024-Update
Brara.E01741.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor 0.03 Orthogroups_2024-Update
Brara.G03341.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 Orthogroups_2024-Update
Glyma.01G172600 No alias NmrA-like negative transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.11G070600 No alias NmrA-like negative transcriptional regulator family protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G002410.2 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 Orthogroups_2024-Update
Kfl00034_0150 kfl00034_0150_v1.... (at1g75290 : 178.0) encodes a protein whose sequence is... 0.03 Orthogroups_2024-Update
LOC_Os01g01650 No alias isoflavone reductase homolog IRL, putative, expressed 0.02 Orthogroups_2024-Update
MA_10427553g0010 No alias (at1g75290 : 214.0) encodes a protein whose sequence is... 0.03 Orthogroups_2024-Update
PSME_00003235-RA No alias (p52579|ifrh_tobac : 315.0) Isoflavone reductase homolog... 0.05 Orthogroups_2024-Update
PSME_00030631-RA No alias (at4g39230 : 275.0) encodes a protein whose sequence is... 0.08 Orthogroups_2024-Update
PSME_00031495-RA No alias (at4g39230 : 387.0) encodes a protein whose sequence is... 0.04 Orthogroups_2024-Update
PSME_00045113-RA No alias (at4g39230 : 265.0) encodes a protein whose sequence is... 0.03 Orthogroups_2024-Update
PSME_00045425-RA No alias (at1g75290 : 145.0) encodes a protein whose sequence is... 0.04 Orthogroups_2024-Update
PSME_00047334-RA No alias (at4g39230 : 271.0) encodes a protein whose sequence is... 0.05 Orthogroups_2024-Update
Potri.003G100200 No alias pinoresinol reductase 1 0.03 Orthogroups_2024-Update
Potri.013G103700 No alias NmrA-like negative transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Seita.5G070300.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 Orthogroups_2024-Update
Seita.5G070400.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor 0.03 Orthogroups_2024-Update
Seita.5G070500.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 Orthogroups_2024-Update
Seita.5G071100.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.01 Orthogroups_2024-Update
Sobic.003G104600.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 Orthogroups_2024-Update
Sobic.003G241300.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 Orthogroups_2024-Update
Solyc03g044720 No alias Isoflavone reductase family protein (AHRD V3.3 *** B9HRL8_POPTR) 0.03 Orthogroups_2024-Update
Solyc05g009860 No alias Leucoanthocyanidin reductase (AHRD V3.3 *-* J7M947_9ERIC) 0.03 Orthogroups_2024-Update
Sopen04g034140 No alias NmrA-like family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008030 NmrA-like 34 267
No external refs found!