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  5. PSME_00034372-RA

PSME_00034372-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000682 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034372-RA
Cluster HCCA clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
At3g21590 No alias Senescence/dehydration-associated protein-like protein... 0.04 Orthogroups_2024-Update
Brara.F02525.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I03457.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.02G046700 No alias Senescence/dehydration-associated protein-related 0.03 Orthogroups_2024-Update
HORVU4Hr1G063980.6 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10436697g0010 No alias (at4g15450 : 259.0) Senescence/dehydration-associated... 0.03 Orthogroups_2024-Update
Seita.4G281700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g083690 No alias LOW QUALITY:Senescence/dehydration-associated... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009686 Senescence/spartin 32 93
No external refs found!