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  5. PSME_00034397-RA

PSME_00034397-RA


Description : (at5g02230 : 313.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G59480.1); Has 2249 Blast hits to 2246 proteins in 493 species: Archae - 16; Bacteria - 743; Metazoa - 0; Fungi - 143; Plants - 201; Viruses - 0; Other Eukaryotes - 1146 (source: NCBI BLink). & (reliability: 626.0) & (original description: no original description)


Gene families : OG_42_0000537 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034397-RA
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Brara.J01323.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G225500 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Orthogroups_2024-Update
MA_272181g0010 No alias (at2g32150 : 245.0) Haloacid dehalogenase-like hydrolase... 0.03 Orthogroups_2024-Update
MA_538167g0010 No alias (at5g02230 : 305.0) Haloacid dehalogenase-like hydrolase... 0.04 Orthogroups_2024-Update
PSME_00004481-RA No alias (at5g02230 : 276.0) Haloacid dehalogenase-like hydrolase... 0.05 Orthogroups_2024-Update
PSME_00004482-RA No alias (at5g02230 : 242.0) Haloacid dehalogenase-like hydrolase... 0.04 Orthogroups_2024-Update
Solyc09g075890 No alias Haloacid dehalogenase-like hydrolase (AHRD V3.3 *** B7FKK9_MEDTR) 0.03 Orthogroups_2024-Update
Sopen06g032720 No alias Haloacid dehalogenase-like hydrolase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!