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  5. PSME_00034513-RA

PSME_00034513-RA


Description : (p37831|lox1_soltu : 809.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (at1g55020 : 774.0) lipoxygenase, a defense gene conferring resistance Xanthomonas campestris; lipoxygenase 1 (LOX1); CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1); Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0; Bacteria - 84; Metazoa - 533; Fungi - 49; Plants - 793; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 1548.0) & (original description: no original description)


Gene families : OG_42_0000116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034513-RA
Cluster HCCA clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
140773 No alias lipoxygenase 3 0.02 Orthogroups_2024-Update
170977 No alias lipoxygenase 1 0.02 Orthogroups_2024-Update
441081 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.03 Orthogroups_2024-Update
A4A49_32174 No alias linoleate 13s-lipoxygenase 3-1, chloroplastic 0.05 Orthogroups_2024-Update
At3g45140 No alias Lipoxygenase 2, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi1g72690 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.03 Orthogroups_2024-Update
Bradi3g07010 No alias lipoxygenase 2 0.02 Orthogroups_2024-Update
Bradi3g39980 No alias lipoxygenase 2 0.05 Orthogroups_2024-Update
Bradi3g59710 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.03 Orthogroups_2024-Update
Bradi5g11590 No alias lipoxygenase 3 0.03 Orthogroups_2024-Update
Brara.B01730.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Brara.G01999.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Brara.G02542.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.05 Orthogroups_2024-Update
Brara.G02544.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Brara.G02545.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.04 Orthogroups_2024-Update
Brara.I04828.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.06 Orthogroups_2024-Update
GRMZM2G109056 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
Glyma.03G264300 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.03 Orthogroups_2024-Update
Glyma.08G189600 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
Glyma.13G030300 No alias lipoxygenase 2 0.03 Orthogroups_2024-Update
Glyma.16G008700 No alias lipoxygenase 3 0.02 Orthogroups_2024-Update
HORVU7Hr1G050670.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g10120 No alias lipoxygenase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g39840 No alias lipoxygenase, chloroplast precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426276g0010 No alias (p37831|lox1_soltu : 201.0) Lipoxygenase 1 (EC... 0.03 Orthogroups_2024-Update
MA_10427506g0010 No alias (at1g55020 : 939.0) lipoxygenase, a defense gene... 0.04 Orthogroups_2024-Update
MA_10427506g0020 No alias (p37831|lox1_soltu : 854.0) Lipoxygenase 1 (EC... 0.04 Orthogroups_2024-Update
MA_10429541g0010 No alias (at1g72520 : 993.0) PLAT/LH2 domain-containing... 0.03 Orthogroups_2024-Update
MA_10430462g0010 No alias (at3g22400 : 148.0) LOX5; FUNCTIONS IN: oxidoreductase... 0.04 Orthogroups_2024-Update
MA_10436100g0010 No alias (p37831|lox1_soltu : 887.0) Lipoxygenase 1 (EC... 0.05 Orthogroups_2024-Update
MA_8597057g0010 No alias (p29250|lox2_orysa : 298.0) Lipoxygenase 2 (EC... 0.03 Orthogroups_2024-Update
Mp1g21930.1 No alias 13-lipoxygenase 0.02 Orthogroups_2024-Update
Mp5g21680.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 Orthogroups_2024-Update
PSME_00036722-RA No alias (p37831|lox1_soltu : 822.0) Lipoxygenase 1 (EC... 0.04 Orthogroups_2024-Update
PSME_00048663-RA No alias (at1g55020 : 448.0) lipoxygenase, a defense gene... 0.03 Orthogroups_2024-Update
Potri.001G015400 No alias lipoxygenase 2 0.03 Orthogroups_2024-Update
Pp1s434_27V6 No alias af361893_1bacterial-induced lipoxygenase 0.03 Orthogroups_2024-Update
Pp1s70_182V6 No alias lipoxygenase 0.02 Orthogroups_2024-Update
Seita.6G205300.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.04 Orthogroups_2024-Update
Seita.9G127700.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.001G125700.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Sobic.001G483400.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.04 Orthogroups_2024-Update
Sobic.003G385500.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.003G385900.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.006G248300.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Sobic.007G210400.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Solyc01g006540 No alias lipoxygenase C 0.04 Orthogroups_2024-Update
Solyc08g029000 No alias Lipoxygenase (AHRD V3.3 *** Q43800_TOBAC) 0.04 Orthogroups_2024-Update
Sopen01g002530 No alias Lipoxygenase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001024 PLAT/LH2_dom 23 95
IPR013819 LipOase_C 108 778
No external refs found!