PSME_00034567-RA

Description : "(at5g23190 : 227.0) cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.; ""cytochrome P450, family 86, subfamily B, polypeptide 1"" (CYP86B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: very long-chain fatty acid biosynthetic process, suberin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G08250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 454.0) & (original description: no original description)"

Gene families : OG_42_0000018 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00034567-RA
Cluster	HCCA clusters: Cluster_248

Target	Alias	Description	ECC score	Gene Family Method
At1g13140	No alias	At1g13140 [Source:UniProtKB/TrEMBL;Acc:Q500V6]	0.03	Orthogroups_2024-Update
At1g24540	No alias	Cytochrome P450, family 86, subfamily C, polypeptide 1...	0.03	Orthogroups_2024-Update
At4g39510	No alias	CYP96A12 [Source:UniProtKB/TrEMBL;Acc:A0A178V036]	0.02	Orthogroups_2024-Update
Bradi1g49831	No alias	cytochrome P450, family 704, subfamily A, polypeptide 2	0.05	Orthogroups_2024-Update
Bradi2g52700	No alias	cytochrome P450, family 94, subfamily D, polypeptide 2	0.03	Orthogroups_2024-Update
Bradi4g42540	No alias	cytochrome P450, family 94, subfamily C, polypeptide 1	0.06	Orthogroups_2024-Update
PSME_00036930-RA	No alias	"(at5g23190 : 227.0) cytochrome P450 CYP86B1, nuclear...	0.03	Orthogroups_2024-Update
PSME_00044316-RA	No alias	"(at2g45510 : 430.0) member of CYP704A; ""cytochrome...	0.04	Orthogroups_2024-Update
PSME_00050874-RA	No alias	"(at5g23190 : 287.0) cytochrome P450 CYP86B1, nuclear...	0.03	Orthogroups_2024-Update
PSME_00051142-RA	No alias	"(at4g00360 : 452.0) Encodes a member of the CYP86A...	0.02	Orthogroups_2024-Update
Potri.015G086900	No alias	cytochrome P450, family 96, subfamily A, polypeptide 1	0.03	Orthogroups_2024-Update
Pp1s332_42V6	No alias	cytochrome p450	0.02	Orthogroups_2024-Update
Pp1s42_270V6	No alias	cytochrome p450	0.04	Orthogroups_2024-Update
Seita.3G299800.1	No alias	jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14...	0.03	Orthogroups_2024-Update
Sobic.001G450100.1	No alias	EC_1.14 oxidoreductase acting on paired donor with...	0.03	Orthogroups_2024-Update
Solyc12g019680	No alias	Cytochrome P450 family protein (AHRD V3.3 *** A0A061DTU0_THECC)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEA	InterProScan predictions
MF	GO:0020037	heme binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Predicted GO
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Predicted GO
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Predicted GO
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Predicted GO
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Predicted GO
MF	GO:0008374	O-acyltransferase activity	IEP	Predicted GO
MF	GO:0009055	electron transfer activity	IEP	Predicted GO
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015988	energy coupled proton transmembrane transport, against electrochemical gradient	IEP	Predicted GO
BP	GO:0015991	ATP hydrolysis coupled proton transport	IEP	Predicted GO
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Predicted GO
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Predicted GO
CC	GO:0044459	plasma membrane part	IEP	Predicted GO
BP	GO:0090662	ATP hydrolysis coupled transmembrane transport	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
CC	GO:0098797	plasma membrane protein complex	IEP	Predicted GO
BP	GO:0099131	ATP hydrolysis coupled ion transmembrane transport	IEP	Predicted GO
BP	GO:0099132	ATP hydrolysis coupled cation transmembrane transport	IEP	Predicted GO
BP	GO:1902600	proton transmembrane transport	IEP	Predicted GO
CC	GO:1990234	transferase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001128	Cyt_P450	76	287

External Links

No external refs found!

PSME_00034567-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation