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  5. PSME_00034569-RA

PSME_00034569-RA


Description : (at3g01930 : 350.0) Major facilitator superfamily protein; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G14120.1); Has 2557 Blast hits to 2447 proteins in 764 species: Archae - 24; Bacteria - 1311; Metazoa - 10; Fungi - 268; Plants - 609; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (reliability: 700.0) & (original description: no original description)


Gene families : OG_42_0000169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034569-RA
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
89169 No alias Major facilitator superfamily protein 0.05 Orthogroups_2024-Update
Brara.G02260.1 No alias UMF23-type solute transporter 0.03 Orthogroups_2024-Update
GRMZM2G106730 No alias Nodulin-like / Major Facilitator Superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G113100 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
PSME_00015340-RA No alias (at2g39210 : 432.0) Major facilitator superfamily... 0.06 Orthogroups_2024-Update
Seita.3G405900.1 No alias UMF23-type solute transporter 0.05 Orthogroups_2024-Update
Solyc09g008370 No alias LOW QUALITY:Major facilitator superfamily protein (AHRD... 0.05 Orthogroups_2024-Update
Sopen02g017250 No alias Nodulin-like 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0051011 microtubule minus-end binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010658 Nodulin-like 13 240
No external refs found!