Description : (o78328|dxs_capan : 1147.0) Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) (CapTKT2) - Capsicum annuum (Bell pepper) & (at4g15560 : 1122.0) Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis; CLOROPLASTOS ALTERADOS 1 (CLA1); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase-like, C-terminal (InterPro:IPR015941), Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477), Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: 1-deoxy-D-xylulose 5-phosphate synthase 1 (TAIR:AT3G21500.2); Has 24450 Blast hits to 24392 proteins in 2940 species: Archae - 267; Bacteria - 15281; Metazoa - 526; Fungi - 278; Plants - 446; Viruses - 0; Other Eukaryotes - 7652 (source: NCBI BLink). & (reliability: 2244.0) & (original description: no original description)
Gene families : OG_42_0001316 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001316_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00034663-RA | |
Cluster | HCCA clusters: Cluster_210 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
268187 | No alias | Deoxyxylulose-5-phosphate synthase | 0.03 | Orthogroups_2024-Update | |
A4A49_04654 | No alias | putative 1-deoxy-d-xylulose-5-phosphate synthase, chloroplastic | 0.02 | Orthogroups_2024-Update | |
Glyma.04G069600 | No alias | 1-deoxy-D-xylulose 5-phosphate synthase 3 | 0.03 | Orthogroups_2024-Update | |
Glyma.07G252600 | No alias | Deoxyxylulose-5-phosphate synthase | 0.06 | Orthogroups_2024-Update | |
Glyma.17G021800 | No alias | Deoxyxylulose-5-phosphate synthase | 0.04 | Orthogroups_2024-Update | |
PSME_00009546-RA | No alias | (o22567|dxs_orysa : 1008.0) Probable... | 0.05 | Orthogroups_2024-Update | |
Potri.006G249700 | No alias | 1-deoxy-D-xylulose 5-phosphate synthase 3 | 0.05 | Orthogroups_2024-Update | |
Sobic.009G135500.1 | No alias | 1-deoxy-D-xylulose 5-phosphate synthase *(DXS) & EC_2.2... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEA | InterProScan predictions |
BP | GO:0016114 | terpenoid biosynthetic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
BP | GO:0006508 | proteolysis | IEP | Predicted GO |
MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
BP | GO:0009308 | amine metabolic process | IEP | Predicted GO |
MF | GO:0009678 | hydrogen-translocating pyrophosphatase activity | IEP | Predicted GO |
BP | GO:0009690 | cytokinin metabolic process | IEP | Predicted GO |
BP | GO:0010817 | regulation of hormone levels | IEP | Predicted GO |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Predicted GO |
BP | GO:0034754 | cellular hormone metabolic process | IEP | Predicted GO |
BP | GO:0042445 | hormone metabolic process | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
No external refs found! |