1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00034799-RA

PSME_00034799-RA


Description : (at1g05690 : 82.0) BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development.; BTB and TAZ domain protein 3 (BT3); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: embryo sac development, pollen development; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 4 (TAIR:AT5G67480.2); Has 1903 Blast hits to 1903 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 1048; Fungi - 0; Plants - 775; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 164.0) & (original description: no original description)


Gene families : OG_42_0002378 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034799-RA
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
Brara.A00127.1 No alias substrate adaptor BT of CUL3-BTB E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
Brara.K01223.1 No alias substrate adaptor BT of CUL3-BTB E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
PSME_00022268-RA No alias (at5g67480 : 166.0) BTB and TAZ domain protein. Located... 0.03 Orthogroups_2024-Update
Pp1s365_10V6 No alias protein binding 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!