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  5. PSME_00034877-RA

PSME_00034877-RA


Description : (at4g35130 : 218.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 46569 Blast hits to 13927 proteins in 247 species: Archae - 0; Bacteria - 4; Metazoa - 46; Fungi - 110; Plants - 45942; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink). & (reliability: 436.0) & (original description: no original description)


Gene families : OG_42_0127186 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034877-RA
Cluster HCCA clusters: Cluster_22


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 188 218
IPR002885 Pentatricopeptide_repeat 338 362
IPR002885 Pentatricopeptide_repeat 106 133
IPR002885 Pentatricopeptide_repeat 472 500
IPR002885 Pentatricopeptide_repeat 502 532
IPR002885 Pentatricopeptide_repeat 158 186
No external refs found!