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  5. PSME_00034933-RA

PSME_00034933-RA


Description : (at2g47710 : 96.7) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 181.0) & (original description: no original description)


Gene families : OG_42_0000093 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034933-RA
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
A4A49_28385 No alias universal stress protein phos34 0.02 Orthogroups_2024-Update
Kfl00628_0080 kfl00628_0080_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.010G123400 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 Orthogroups_2024-Update
Sobic.003G051600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen06g035920 No alias Universal stress protein family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006016 UspA 11 161
No external refs found!