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  5. PSME_00034948-RA

PSME_00034948-RA


Description : (at2g30020 : 319.0) Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.; Protein phosphatase 2C family protein; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G07160.1); Has 6969 Blast hits to 6779 proteins in 496 species: Archae - 2; Bacteria - 405; Metazoa - 1770; Fungi - 794; Plants - 2680; Viruses - 9; Other Eukaryotes - 1309 (source: NCBI BLink). & (reliability: 638.0) & (original description: no original description)


Gene families : OG_42_0000847 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000847_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034948-RA
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
13829 No alias Protein phosphatase 2C family protein 0.06 Orthogroups_2024-Update
65249 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
A4A49_39253 No alias putative protein phosphatase 2c 25 0.06 Orthogroups_2024-Update
AC208201.3_FG002 No alias Protein phosphatase 2C family protein 0.07 Orthogroups_2024-Update
Brara.C02062.1 No alias clade B phosphatase 0.02 Orthogroups_2024-Update
GRMZM2G000603 No alias Protein phosphatase 2C family protein 0.04 Orthogroups_2024-Update
GRMZM2G465287 No alias Protein phosphatase 2C family protein 0.07 Orthogroups_2024-Update
Glyma.02G228200 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Glyma.11G170200 No alias Protein phosphatase 2C family protein 0.04 Orthogroups_2024-Update
Glyma.11G171600 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Glyma.18G061000 No alias Protein phosphatase 2C family protein 0.05 Orthogroups_2024-Update
LOC_Os03g18150 No alias protein phosphatase 2C, putative, expressed 0.04 Orthogroups_2024-Update
MA_10426697g0020 No alias (at1g07160 : 330.0) Protein phosphatase 2C family... 0.05 Orthogroups_2024-Update
MA_10429333g0010 No alias (at2g30020 : 329.0) Encodes AP2C1. Belongs to the clade... 0.06 Orthogroups_2024-Update
MA_10430806g0010 No alias (at2g30020 : 142.0) Encodes AP2C1. Belongs to the clade... 0.09 Orthogroups_2024-Update
MA_10431780g0010 No alias (at2g30020 : 326.0) Encodes AP2C1. Belongs to the clade... 0.12 Orthogroups_2024-Update
MA_3395g0010 No alias (at2g30020 : 322.0) Encodes AP2C1. Belongs to the clade... 0.08 Orthogroups_2024-Update
PSME_00047258-RA No alias (at2g30020 : 317.0) Encodes AP2C1. Belongs to the clade... 0.12 Orthogroups_2024-Update
Potri.008G070400 No alias phosphatase 2C5 0.02 Orthogroups_2024-Update
Seita.9G440500.1 No alias clade B phosphatase 0.05 Orthogroups_2024-Update
Sobic.001G406300.1 No alias clade B phosphatase 0.05 Orthogroups_2024-Update
Sobic.005G087800.1 No alias clade B phosphatase 0.12 Orthogroups_2024-Update
Solyc06g007190 No alias Protein phosphatase 2C (AHRD V3.3 *** Q3V656_SOLTU) 0.03 Orthogroups_2024-Update
Sopen05g031070 No alias Protein phosphatase 2C 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 139 392
No external refs found!