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  5. PSME_00034985-RA

PSME_00034985-RA


Description : (at2g39210 : 444.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (reliability: 888.0) & (original description: no original description)


Gene families : OG_42_0000169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034985-RA
Cluster HCCA clusters: Cluster_388

Target Alias Description ECC score Gene Family Method Actions
A4A49_21347 No alias protein nuclear fusion defective 4 0.03 Orthogroups_2024-Update
A4A49_27924 No alias protein nuclear fusion defective 4 0.02 Orthogroups_2024-Update
At1g18940 No alias F14D16.8 [Source:UniProtKB/TrEMBL;Acc:Q9LMD4] 0.02 Orthogroups_2024-Update
Bradi1g12440 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g07330 No alias Major facilitator superfamily protein 0.05 Orthogroups_2024-Update
Glyma.03G185100 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G145600 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.16G158200 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G185600 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os03g58580 No alias nodulin, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g44180 No alias nodulin, putative, expressed 0.03 Orthogroups_2024-Update
MA_116104g0010 No alias (at2g39210 : 585.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
MA_323184g0010 No alias (at2g39210 : 515.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
MA_545504g0010 No alias (at2g39210 : 337.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00001323-RA No alias (at2g39210 : 458.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00004095-RA No alias (at2g28120 : 219.0) Major facilitator superfamily... 0.05 Orthogroups_2024-Update
PSME_00020952-RA No alias (at2g39210 : 423.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00039754-RA No alias (at2g39210 : 439.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00053776-RA No alias (at2g28120 : 281.0) Major facilitator superfamily... 0.05 Orthogroups_2024-Update
PSME_00053941-RA No alias (at2g39210 : 466.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
Sobic.008G191100.1 No alias UMF23-type solute transporter 0.02 Orthogroups_2024-Update
Solyc03g019650 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT5G14120.1) 0.02 Orthogroups_2024-Update
Solyc11g066330 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT2G28120.1) 0.03 Orthogroups_2024-Update
Sopen03g029970 No alias Nodulin-like 0.02 Orthogroups_2024-Update
Sopen10g033400 No alias Nodulin-like 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR010658 Nodulin-like 15 261
No external refs found!