1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00035025-RA

PSME_00035025-RA


Description : (at1g29520 : 143.0) AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 286.0) & (original description: no original description)


Gene families : OG_42_0000530 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000530_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00035025-RA
Cluster HCCA clusters: Cluster_553

Target Alias Description ECC score Gene Family Method Actions
A4A49_13683 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_32402 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi2g47520 No alias AWPM-19-like family protein 0.05 Orthogroups_2024-Update
Glyma.15G195600 No alias AWPM-19-like family protein 0.03 Orthogroups_2024-Update
MA_16601g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00054243-RA No alias (at1g29520 : 109.0) AWPM-19-like family protein;... 0.04 Orthogroups_2024-Update
Potri.011G077800 No alias AWPM-19-like family protein 0.03 Orthogroups_2024-Update
Pp1s11_296V6 No alias plasma membrane associated protein 0.03 Orthogroups_2024-Update
Sopen01g032080 No alias AWPM-19-like family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0050662 coenzyme binding IEP Predicted GO
InterPro domains Description Start Stop
IPR008390 AWPM-19 15 155
No external refs found!