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  5. PSME_00035042-RA

PSME_00035042-RA


Description : (at3g45880 : 406.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G19840.2); Has 1138 Blast hits to 1132 proteins in 270 species: Archae - 0; Bacteria - 266; Metazoa - 428; Fungi - 156; Plants - 146; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 812.0) & (original description: no original description)


Gene families : OG_42_0007275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007275_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00035042-RA
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
HORVU5Hr1G072640.1 No alias histone demethylase *(PKDM13) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!