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  5. PSME_00035075-RA

PSME_00035075-RA


Description : (at4g37040 : 297.0) encodes a methionine aminopeptidase; methionine aminopeptidase 1D (MAP1D); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, N-terminal protein amino acid modification; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1B (TAIR:AT1G13270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 594.0) & (original description: no original description)


Gene families : OG_42_0001154 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001154_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00035075-RA
Cluster HCCA clusters: Cluster_687

Target Alias Description ECC score Gene Family Method Actions
PSME_00056103-RA No alias (at4g37040 : 194.0) encodes a methionine aminopeptidase;... 0.06 Orthogroups_2024-Update
evm.model.contig_441.17 No alias (at2g45240 : 338.0) Encodes a cytoplasmic MAP1 like... 0.03 Orthogroups_2024-Update
evm.model.tig00020554.98 No alias (at4g37040 : 338.0) encodes a methionine aminopeptidase;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000994 Pept_M24 105 265
IPR000994 Pept_M24 292 517
No external refs found!