1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00035126-RA

PSME_00035126-RA


Description : (at4g24050 : 316.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G64590.1); Has 59308 Blast hits to 59247 proteins in 3068 species: Archae - 448; Bacteria - 39701; Metazoa - 3820; Fungi - 3579; Plants - 1905; Viruses - 0; Other Eukaryotes - 9855 (source: NCBI BLink). & (q01289|por_pea : 83.2) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Pisum sativum (Garden pea) & (reliability: 632.0) & (original description: no original description)


Gene families : OG_42_0000257 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000257_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00035126-RA
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
228800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
421434 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
At4g24050 No alias AT4g24050/T19F6_40 [Source:UniProtKB/TrEMBL;Acc:O22985] 0.03 Orthogroups_2024-Update
Brara.I01308.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.05G208800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G208961 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G135200 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G161300 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
MA_125991g0010 No alias (at4g23430 : 154.0) NAD(P)-binding Rossmann-fold... 0.04 Orthogroups_2024-Update
PSME_00007726-RA No alias (at4g24050 : 382.0) NAD(P)-binding Rossmann-fold... 0.05 Orthogroups_2024-Update
PSME_00011878-RA No alias (at5g02540 : 428.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
PSME_00042292-RA No alias (at1g64590 : 200.0) NAD(P)-binding Rossmann-fold... 0.04 Orthogroups_2024-Update
Pp1s50_45V6 No alias retinol dehydrogenase 14 0.02 Orthogroups_2024-Update
Solyc08g082870 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Sopen03g004240 No alias short chain dehydrogenase 0.02 Orthogroups_2024-Update
Sopen09g005240 No alias short chain dehydrogenase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002347 SDR_fam 23 162
No external refs found!