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  5. PSME_00035254-RA

PSME_00035254-RA


Description : (original description: no original description)


Gene families : OG_42_0000142 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00035254-RA
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
At3g51590 No alias Non-specific lipid-transfer protein 12... 0.02 Orthogroups_2024-Update
HORVU3Hr1G009520.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g60740 No alias LTPL16 - Protease inhibitor/seed storage/LTP family... 0.02 Orthogroups_2024-Update
PSME_00026248-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00041501-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.011G021900 No alias lipid transfer protein 12 0.02 Orthogroups_2024-Update
Sobic.008G030600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G030700.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 32 105
No external refs found!