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  5. PSME_00035258-RA

PSME_00035258-RA


Description : (at3g51680 : 253.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 240.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 506.0) & (original description: no original description)


Gene families : OG_42_0000111 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00035258-RA
Cluster HCCA clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
A4A49_00051 No alias zerumbone synthase 0.04 Orthogroups_2024-Update
A4A49_10897 No alias xanthoxin dehydrogenase 0.02 Orthogroups_2024-Update
A4A49_33801 No alias short-chain dehydrogenase reductase 4 0.02 Orthogroups_2024-Update
At3g42960 No alias Short-chain dehydrogenase reductase ATA1... 0.04 Orthogroups_2024-Update
At3g51680 No alias Short-chain dehydrogenase reductase 2a... 0.04 Orthogroups_2024-Update
At4g03140 No alias NAD(P)-binding Rossmann-fold superfamily protein... 0.02 Orthogroups_2024-Update
Bradi5g10757 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Brara.C02351.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.E00077.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Brara.I00208.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G156739 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G222700 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G190100 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G092900 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os03g61740 No alias sex determination protein tasselseed-2, putative, expressed 0.03 Orthogroups_2024-Update
MA_954240g0010 No alias (at4g03140 : 231.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
PSME_00006759-RA No alias (at3g51680 : 233.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
Potri.006G206900 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
Seita.2G441800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G117600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G436000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G042000.1 No alias xanthoxin oxidase *(ABA2) 0.03 Orthogroups_2024-Update
Solyc12g056610 No alias NAD(P)-binding Rossmann-fold superfamily protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc12g056710 No alias NAD(P)-binding Rossmann-fold superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen10g032650 No alias short chain dehydrogenase 0.05 Orthogroups_2024-Update
Sopen12g029260 No alias Enoyl-(Acyl carrier protein) reductase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!