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  5. Solyc02g070200

Solyc02g070200


Description : FAD-binding Berberine family protein (AHRD V3.3 *** A0A061GF79_THECC)


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g070200
Cluster HCCA clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G113400 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.05G122000 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.09G027200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
MA_10430302g0010 No alias (at4g20820 : 150.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
MA_162773g0010 No alias (at4g20860 : 377.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
MA_5468901g0010 No alias (at5g44400 : 157.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
Potri.011G158000 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Seita.4G178000.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Solyc02g070090 No alias FAD-binding Berberine family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g065060 No alias FAD-binding Berberine family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc10g054470 No alias FAD-binding Berberine family protein (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
InterPro domains Description Start Stop
IPR012951 BBE 472 527
IPR006094 Oxid_FAD_bind_N 75 211
No external refs found!